Viewing Results in Standard Voxel Space: Difference between revisions
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The results of selxavg3-sess using data preprocessed to match the mni305 template are viewed using tkmedit | The results of selxavg3-sess using data preprocessed to match the mni305 template are viewed using tkmedit | ||
tkmedit -s <sessid> -analysis <analysis name> -c <contrast name> | tkmedit -s <sessid> -analysis <analysis name> -c <contrast name> | ||
For example, after running | For example, after running <code>selxavg3-sess -s FS_0183 -analysis FAM.sm4.mni </code>, the '''bold''' directory for this subject will contain a folder for the FAM.sm4.mni analysis. I ran several contrasts, including one for '''task''' and one for '''familiar_vs_unfamiliar'''. The '''task''' contrast can be viewed in tkmedit thus: | ||
tkmedit -s FS_0183 -analysis FAM.sm4.mni -c task | tkmedit -s FS_0183 -analysis FAM.sm4.mni -c task | ||
[[Category: FreeSurfer]] | |||
Latest revision as of 12:17, 31 May 2019
The results of selxavg3-sess using data preprocessed to match the mni305 template are viewed using tkmedit
tkmedit -s <sessid> -analysis <analysis name> -c <contrast name>
For example, after running selxavg3-sess -s FS_0183 -analysis FAM.sm4.mni , the bold directory for this subject will contain a folder for the FAM.sm4.mni analysis. I ran several contrasts, including one for task and one for familiar_vs_unfamiliar. The task contrast can be viewed in tkmedit thus:
tkmedit -s FS_0183 -analysis FAM.sm4.mni -c task